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強(qiáng)大生信分析助力精準(zhǔn)醫(yī)學(xué)

面對(duì)海量的二代測(cè)序數(shù)據(jù),“千方百計(jì)”仍得不到有價(jià)值的信息?沒(méi)關(guān)系,基石生命原創(chuàng)算法幫您“變廢為寶”

優(yōu)勢(shì)

原創(chuàng)精準(zhǔn)醫(yī)療算法

 

算法靈敏度和特異性優(yōu)于其他算法

案例分析

(一)   肝內(nèi)膽管癌分析

肝內(nèi)膽管癌分析:通過(guò)對(duì)不同患者肝內(nèi)膽管癌的WES測(cè)序,分析ICC患者中強(qiáng)烈的時(shí)間和空間異質(zhì)性,并發(fā)現(xiàn)了進(jìn)化模型,無(wú)論是體細(xì)胞突變還是克隆結(jié)構(gòu),都是有多個(gè)機(jī)制造成,如克隆“錯(cuò)覺(jué)”、平行進(jìn)化和染色體不穩(wěn)定性。

發(fā)表: Journal of Hepatology.2018Mar.online

合作單位:復(fù)旦大學(xué)附屬中山醫(yī)院

(二)700余例胎兒先天性心臟病病例分析 

相較其他算法陽(yáng)性檢出率(基因變異與臨床表型吻合度)由10%提高到50%

病例1(左):22號(hào)染色體q11位置發(fā)現(xiàn)微缺失,預(yù)測(cè)疾病與臨床表型吻合

病例2(右):13號(hào)染色體發(fā)現(xiàn)大片段拷貝數(shù)增加,為嵌合體,預(yù)測(cè)疾病與臨床表型吻合

合作醫(yī)院:首都醫(yī)科大學(xué)附屬北京安貞醫(yī)院

服務(wù)流程

 

參考文獻(xiàn):

1、Liang QingDong,YangShi,Li-JieMa,et al.Spatial and temporal clonal evolution of intrahepatic cholangiocarcinoma.[J].Journal of Hepatology.2018,69(1):89-98.

2、Bass AJ,Thorsson V, Shmulevich I, Reynolds SM, Miller M, et al.Comprehensive molecularcharacterization of gastric adenocarcinoma.[J]. Nature, 2014, 513(7517):202-209.

3、Yuchao Xia,YunLiu ,et al.Pysim-sv: a package for simulating structuralvariation data with GC-biases.[J]. BMCBioinformatics, 2017,18(suppl3): 53.

4、Chang J, Tan W,Ling Z, et al. Genomic analysis of oesophageal squamous-cell carcinomaidentifies alcohol drinking-related mutation signature and genomicalterations[J]. Nature Communications, 2017, 8:15290.

5、Yang L,Luquette L J, Gehlenborg N, et al. Diverse mechanisms of somatic structuralvariations in human cancer genomes[J]. Cell, 2013, 153(4):919-929.

6. Xi R, Gibbs R A, Kucherlapati R, et al. Copynumber variation detection in whole-genome sequencing data using the Bayesianinformation criterion[J]. Proceedings of the National Academy of Sciences ofthe United States of America, 2011, 108(46):18583-18584.

7、Xi R, Lee S,Xia Y, et al. Copy number analysis of whole-genome data using BIC-seq2 and itsapplication to detection of cancer susceptibility variants.[J]. Nucleic AcidsResearch, 2016, 44(13):6274.